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Programming Software available at OSC

ACML - The AMD Core Math Library (ACML) is a set of numerical routines tuned specifically for AMD64 platform processors

bcMPI - a software package that implements MPI extensions for MATLAB and GNU Octave

FFTW - a C subroutine library for computing the discrete Fourier transform (DFT)

HDF5 - a general purpose library and file format for storing scientific data

Intel Compilers - an array of software development products from Intel, including C++, FORTRAN compilers, Math Kernel Library(MKL), and Vtune Perf Analyzer

Intel MKL*- Intel Math Kernel Library. It contains LAPACK, BLAS, some FFT routines, and a miscellany of other math capabilities.

Mathematica - From simple calculator operations to large-scale programming and interactive document preparation, Mathematica is the tool of choice at the frontiers of scientific research, in engineering analysis and modeling, in technical education from high school to graduate school, and wherever quantitative methods are used

MATLAB - a technical computing environment for high-performance numeric computation and visualization that integrates numerical analysis, matrix computation, signal processing, and graphics in an easy-to-use envionment

MINPACK - a library of Fortran routines for the solution of non-linear, multivariate minimization problems

mpiexec - a replacement program for the script mpirun, which is part of the mpich package. It is used to initialize a parallel job from within a pbs batch or interactive environment.

MPI Library - a standard library for performing parallel processing using a distributed-memory model

NAG Libraries* - comprehensive collections of routines for the solution of numerical and statistical problems

NetCDF (Network Common Data Form) - is an interface for array-oriented data access

Octave - a high-level language, primarily intended for numerical computations

PBS - a networked subsystem for submitting, monitoring, and controlling a work load of batch jobs on one or more systems

PGI compilers - Parallel Fortran, C, C++ compilers for Intel platforms

R - a language and environment for statistical computing and graphics

ScaLAPACK - a library of high-performance linear algebra routines for distributed-memory message-passing MIMD computers and networks of workstations supporting PVM and/or MPI

sprng & sprng2 - a scalable package for parallel pseudo random number generation

Stata - a complete, integrated statistical package that provides everything needed for data analysis, data management, and graphics

TotalView Technologies Totalview* - debugger for complex code

* Indicates software available through OSC's Statewide Software License Distribution

Availability by machine

Name
Altix
BALE
Cluster
Itanium-2
Cluster
Intel P4
Cluster
Opteron
Cluster
ACML
No
No
No
bcMPI
FFTW
No
HDF5
No
Intel Compilers
No
No
No
Intel MKL*
No
No
Mathematica
No
No
MATLAB
No
No
MINPACK
No
No
No
mpiexec
No
MPI Library
No
NAG Libraries
NetCDF
Octave
No
PBS
No
PGI compilers
No
No
No
R
No
ScaLAPACK
No
No
No
sprng & sprng2
No
No
No
No
Stata
No
No
No
No
Totalview*
No
No
No