BioPerl offers a set of perl modules which can be used for sequence manipulation. Knowledge of PERL programming is required.

Availability & Restrictions

BioPerl is available without restriction to all OSC users.

The following versions of BioPerl are available:

Version Oakley
1.6.1 X


Using BioPerl

This is an example of how to use bioperl and access the sequence package on the Oakley Cluster.

use lib '/usr/local/bioperl/1.6.1/lib/perl5/'
use Bio::Seq;

Further Reading

See Also

Fields of Science: