BioPerl offers a set of perl modules which can be used for sequence manipulation. Knowledge of PERL programming is required.
Availability & Restrictions
BioPerl is available without restriction to all OSC users.
The following versions of BioPerl are available:
This is an example of how to use bioperl and access the sequence package on the Oakley Cluster.
use lib '/usr/local/bioperl/1.6.1/lib/perl5/' use Bio::Seq;