eXpress

eXpress is a streaming tool for quantifying the abundances of a set of target sequences from sampled subsequences.

Availability and Restrictions

The following versions of eXpress are available on OSC clusters:

Version Oakley Owens
1.5.1 X* X*
*: Current default version

You can use  module spider express   to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.

Access

eXpress is available to all OSC users without restriction.

Usage on Oakley

Set-up

To configure your environment for use of eXpress, run the following command:   module load express  . The default version will be loaded. To select a particular eXpress version, use   module load express/version  . For example, use  module load express/1.5.1    to load eXpress 1.5.1.

Usage on Owens

Set-up

To configure your environment for use of eXpress, run the following command:   module load express  . The default version will be loaded. To select a particular eXpress version, use   module load express/version  . For example, use  module load express/1.5.1    to load eXpress 1.5.1.

Further Reading

Service: 
Fields of Science: