TrimGalore is a wrapper tool that automates quality and adapter trimming to FastQ files. It also provides functionality to RRBS sequence files.
Availability and Restrictions
TrimGalore is available on the Owens cluster. The versions currently available at OSC are:
You can use
module spider trimgaloreto view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.
TrimGalore is available without restriction to all OSC users.
Usage on Owens
To configure your enviorment for use of TrimGalore, use command
module load trimgalore. This will load the default version.