Ruby

GPU-BLAST

GPU-BLAST is an accelerated version of the popular NCBI-BLAST (www.ncbi.nlm.nih.gov) that uses general-purpose graphics processing unit (GPU). In comparison to the sequential NCBI-BLAST, GPU-BLAST is nearly four times faster, while producing identical results.

Availability and Restrictions

Versions

The following versions of GPU-BLAST are available on OSC systems:

VirtualGL

VirtualGL allows OpenGL applications to run with 3D hardware accerlation.

Availability & Restrictions

Versions

The following versions of VirtualGL are available on OSC clusters:

OnDemand Desktop App: MATLAB

MATLAB allows matrix manipulations, plotting of functions and data, implementation of algorithms, creation of user interfaces, and interfacing with programs written in other languages, including C, C++, C#, Java, Fortran and Python.

Accessing through OnDemand

All the desktop apps can be found within the 'Interactive Apps' dropdown in our OnDemand web portal as shown in the image below:

access

 

OnDemand Desktop App: RStudio Server

RStudio is an integrated development environment (IDE) for R. It includes a console, syntax-highlighting editor that supports direct code execution, as well as tools for plotting, history, debugging and workspace management.

Accessing through OnDemand

All the desktop apps can be found within the 'Desktop Apps' dropdown in our OnDemand web portal as shown in the image below:

Image of OnDemand Desktop Apps Dropdown

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