STAR

STAR: Spliced Transcripts Alignment to a Reference.

Availability and Restrictions

Versions

The following versions of STAR are available on OSC clusters:

Version Oakley Owens
2.5.2a  X*  X*
2.6.0a   X
* Current default version

You can use module spider star to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.

Access

STAR is available to all OSC users without restriction.

Publisher/Vendor/Repository and License Type

Alexander Dobin, Open source

Usage

Usage on Oakley

Set-up

To configure your environment for use of STAR, run the following command: module load star. The default version will be loaded. To select a particular STAR version, use module load star/version. For example, use  module load star/2.5.2a to load STAR 2.5.2a.

Usage on Owens

Set-up

To configure your environment for use of STAR, run the following command: module load star. The default version will be loaded. To select a particular STAR version, use module load star/version. For example, use module load star/2.5.2a to load STAR 2.5.2a.

Further Reading

Supercomputer: 
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