Gurobi

Gurobi is a mathematical optimization solver that supports a variety of programming and modeling languages.

Availability and Restrictions

Versions

The following versions of bedtools are available on OSC clusters:

Version	Owens
8.1.1	X*
9.1.2	X

* Current default version

You can use module spider gurobi to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.

Access

Gurobi is available to academic OSC users with proper validation. In order to obtain validation, please contact OSC Help for further instruction.

Publisher/Vendor/Repository and License Type

Gurobi Optimization, LLC/ Free academic floating license

Usage

Usage on Owens

Set-up

To configure your environment for use of gurobi, run the following command: module load gurobi. The default version will be loaded. To select a particular Gurobi version, use module load gurobi/version. For example, use module load gurobi/8.1.1 to load Gurobi 8.1.1.

You may use Gurobi in python or matlab. In that case, you also need to load our gurobi module first in order to use the central license. So, before you use it on Python or Matlab, use module load gurobi.