LS-PrePost
LS-PrePost is an advanced pre and post-processor that is delivered free with LS-DYNA.
Availability and Restrictions
Versions
The following versions of ls-prepost
are available on OSC clusters:
LS-PrePost is an advanced pre and post-processor that is delivered free with LS-DYNA.
The following versions of ls-prepost
are available on OSC clusters:
QGIS is a user friendly Open Source Geographic Information System (GIS) licensed under the GNU General Public License. QGIS is an official project of the Open Source Geospatial Foundation (OSGeo). It runs on Linux, Unix, Mac OSX, Windows and Android and supports numerous vector, raster, and database formats and functionalities.
The following versions of QGIS are available on OSC clusters:
Gaussian is a very popular general purpose electronic structure program. Recent versions can perform density functional theory, Hartree-Fock, Möller-Plesset, coupled-cluster, and configuration interaction calculations among others. Geometry optimizations, vibrational frequencies, magnetic properties, and solution modeling are available. It performs well as black-box software on closed-shell ground state systems.
Bismark is a program to map bisulfite treated sequencing reads to a genome of interest and perform methylation calls in a single step.
The following versions of bedtools are available on OSC clusters:
Gurobi is a mathematical optimization solver that supports a variety of programming and modeling languages.
The following versions of bedtools are available on OSC clusters:
LS-OPT is a package for design optimization, system identification, and probabilistic analysis with an interface to LS-DYNA.
The following versions of ls-opt
are available on OSC clusters:
Clustal W is a multiple sequence alignment program written in C++.
The following versions of bedtools are available on OSC clusters:
MUSCLE is a program for creating multiple alignments of protein sequences.
The following versions of bedtools are available on OSC clusters:
"Horovod is a distributed training framework for TensorFlow, Keras, PyTorch, and MXNet. The goal of Horovod is to make distributed Deep Learning fast and easy to use. The primary motivation for this project is to make it easy to take a single-GPU TensorFlow program and successfully train it on many GPUs faster."
Quote from Horovod Github documentation.
metilene is a software tool to annotate differentally methylated regions and differentially methylated CpG sites.
The following versions of bedtools are available on OSC clusters: