Trinity represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data.
Availability and Restrictions
The following versions of Trinity are available on OSC clusters:
* Current default version
You can use
module spider trinityrnaseq to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.
Trinity is available to all OSC users. If you have any questions, please contact OSC Help.
Publisher/Vendor/Repository and License Type
Broad Institute and the Hebrew University of Jerusalem, Open source
Usage on Pitzer and Owens
To configure your environment for use of Trinity, run the following command:
module load trinityrnaseq. The default version will be loaded. To select a particular Trinity version, use
module load trinityrnaseq/version. For example, use
module load trinityrnaseq/2.11.0to load Trinity 2.11.0.
Fields of Science: