Gurobi is a mathematical optimization solver that supports a variety of programming and modeling languages.
Availability and Restrictions
The following versions of bedtools are available on OSC clusters:
You can use
module spider gurobi to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.
Gurobi is available to academic OSC users with proper validation. In order to obtain validation, please contact OSC Help for further instruction.
Publisher/Vendor/Repository and License Type
Gurobi Optimization, LLC/ Free academic floating license
Usage on Owens
module load gurobi. The default version will be loaded. To select a particular Gurobi version, use
module load gurobi/version. For example, use
module load gurobi/8.1.1to load Gurobi 8.1.1.
You may use Gurobi in Python or Matlab. In either case, you also need to load our gurobi module first in order to use the central license. So, before you use it in Python or Matlab, use
module load gurobi.
In addition, if you are using Gurobi for Matlab then you will need to setup Gurobi inside Matlab: launch
matlab; change to the gurobi directory using the commad
cd /usr/local/gurobi/VERSION/matlab (where VERSION is the version of Gurobi you are using); and execute the command