Available software list on Next Gen Ascend

Available Software

  • R: R/4.4.0
  • afni: afni/2024.10.14
  • alphafold: alphafold/2.3.2
  • alphafold3: alphafold3/3.0.1
  • amber: amber/24
  • amd-hpc-benchmarks: amd-hpc-benchmarks/2024-10
  • aocc: aocc/4.2.0, aocc/5.0.0
  • app_code_server: app_code_server/4.8.3
  • app_jupyter: app_jupyter/4.1.5
  • bcftools: bcftools/1.17, bcftools/1.21
  • bedtools2: bedtools2/2.31.0
  • blast-database: blast-database/2024-07
  • blast-plus: blast-plus/2.16.0
  • blender: blender/4.2
  • boost: boost/1.83.0
  • bowtie: bowtie/1.3.1
  • bowtie2: bowtie2/2.5.1
  • bwa: bwa/0.7.17
  • cmake: cmake/3.25.2
  • connectome-workbench: connectome-workbench/1.3.2, connectome-workbench/2.0.0
  • cp2k: cp2k/2023.2
  • cuda: cuda/11.8.0, cuda/12.4.1, cuda/12.6.2
  • cuda-samples: cuda-samples/11.8, cuda-samples/12.4.1, cuda-samples/12.6
  • cudnn: cudnn/8.9.7.29-12
  • cufflinks: cufflinks/2.2.1
  • curl: curl/8.4.0
  • darshan-runtime: darshan-runtime/3.4.6
  • darshan-util: darshan-util/3.4.6
  • dcm2nii: dcm2nii/11_12_2024
  • desmond: desmond/2023.4
  • dsi-studio: dsi-studio/2025.Jan
  • fastqc: fastqc/0.12.1
  • ffmpeg: ffmpeg/4.3.2, ffmpeg/6.1.1
  • fftw: fftw/3.3.10
  • fmriprep: fmriprep/20.2.0, fmriprep/24.1.1
  • freesurfer: freesurfer/6.0.0, freesurfer/7.2.0, freesurfer/7.3.2, freesurfer/7.4.1
  • fsl: fsl/6.0.7.13
  • gatk: gatk/4.6.0.0
  • gaussian: gaussian/g16c02
  • gcc: gcc/12.3.0, gcc/13.2.0
  • gdal: gdal/3.7.3
  • geos: geos/3.12.0
  • gromacs: gromacs/2024.4
  • gsl: gsl/2.7.1
  • gurobi: gurobi/12.0.0
  • hdf5: hdf5/1.14.3
  • hpctoolkit: hpctoolkit/2023.08.1
  • hpcx: hpcx/2.17.1
  • htslib: htslib/1.20
  • intel: intel/2021.10.0
  • intel-oneapi-mkl: intel-oneapi-mkl/2023.2.0, intel-oneapi-mkl/2024.1.0
  • intel-oneapi-mpi: intel-oneapi-mpi/2021.10.0, intel-oneapi-mpi/2021.12.1
  • intel-oneapi-tbb: intel-oneapi-tbb/2021.10.0
  • intel-oneapi-vtune: intel-oneapi-vtune/2024.2.1
  • julia: julia/1.10.4
  • lammps: lammps/20230802.3
  • libjpeg-turbo: libjpeg-turbo/3.0.2
  • lightdesktop_base: lightdesktop_base/rhel9
  • matlab: matlab/r2024a
  • miniconda3: miniconda3/24.1.2-py310
  • modules: modules/sp2025
  • mricrogl: mricrogl/1.2.20220720
  • mriqc: mriqc/0.16.1, mriqc/23.1.0rc0, mriqc/24.1.0
  • mvapich: mvapich/3.0
  • mvapich-plus: mvapich-plus/4.0
  • mvapich2: mvapich2/2.3.7-1
  • namd: namd/3.0
  • nccl: nccl/2.19.3-1
  • ncview: ncview/2.1.10
  • netcdf-c: netcdf-c/4.8.1
  • netcdf-cxx4: netcdf-cxx4/4.3.1
  • netcdf-fortran: netcdf-fortran/4.6.1
  • neuropointillist: neuropointillist/0.0.0.9000
  • nextflow: nextflow/24.10.4
  • node-js: node-js/20.12.0, node-js/22.12.0
  • novnc: novnc/1.4.0
  • nvhpc: nvhpc/24.11, nvhpc/25.1
  • oneapi: oneapi/2023.2.3, oneapi/2024.1.0
  • openfoam: openfoam/2312
  • openjdk: openjdk/17.0.8.1_1
  • openmpi: openmpi/5.0.2
  • openmpi-cuda: openmpi-cuda/5.0.2
  • orca: orca/5.0.4
  • osu-micro-benchmarks: osu-micro-benchmarks/7.3
  • parallel-netcdf: parallel-netcdf/1.12.3
  • picard: picard/3.0.0
  • proj: proj/9.2.1
  • project: project/flowbelow, project/ondemand, project/pas1531
  • python: python/3.12
  • pytorch: pytorch/2.5.0
  • qchem: qchem/6.2.1, qchem/6.2.2
  • quantum-espresso: quantum-espresso/7.3.1
  • reframe: reframe/3.11.2
  • relion: relion/5.0.0
  • rosetta: rosetta/3.12
  • ruby: ruby/3.3.6
  • samtools: samtools/1.17, samtools/1.21
  • scipion: scipion/3.7.1
  • snpeff: snpeff/5.2c
  • spack: spack/0.21.1
  • spark: spark/3.5.1
  • spm: spm/8, spm/12.7771
  • sratoolkit: sratoolkit/3.0.2
  • star: star/2.7.10b
  • texlive: texlive/2024
  • topaz: topaz/anacondaApril25
  • turbovnc: turbovnc/3.1.1
  • vcftools: vcftools/0.1.16
  • virtualgl: virtualgl/3.1.1
  • visit: visit/3.3.3, visit/3.4.2
  • xalt: xalt/latest