FSL

FSL is a library of tools for analyzing FMRI, MRI and DTI brain imaging data.

Availability and Restrictions

Versions

The following versions of FSL are available on OSC clusters:

VERSION OWENS
5.0.10

X*

* Curent default version

You can use module spider fsl to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.

Access

FSL is available to all academic OSC users with proper validation. In order to obtain validation, please contact OSC Help for further instruction.

Usage

Usage on Owens

Set-up

Configure your environment for use of FSL with module load fsl. This will load the default version.

Using FSL GUI

Access the FSL GUI with command

fsl

This will bring up a menu of all FSL tools. For information on individual FSL tools see FSL Overview page.

Further Reading 

Fields of Science: