Pitzer
System Downtime Mar 22, 2022
Classroom Guide for Students
Join a Classroom Project
Your classroom instructor will provide you with a project and access code that will allow you to join the classroom project. Visit our user management page for more information.
Emergency maintenance in data center Feb 10 2022
QGIS 3.16.14 and 3.22.1 are available on Owens and Pitzer.
QGIS version 3.16.14 (LTR) and 3.22.1 are now available on Owens and Pitzer. Usage via OnDemand QGIS application.
Unblur
Unblur is used to align the frames of movies recorded on an electron microscope to reduce image blurrig due to beam-induced motion. It reads stacks of movies that are stored in MRC/CCP4 format. Unblur generates frame sums that can be used in subsequent image processing steps and optionally applies an exposure-dependent filter to maximize the signal at all resolutions in the frame averages. Movie frame sums can also be calculated using Summovie, which uses the alignment resuls from a prior run of Unblur.
OpenCV 4.5.4 is available on Pitzer
Open source computer vision 4.5.4 has been installed with gnu/9.1.0 compilers on Pitzer. Usage is via the module opencv/4.5.4. For help loading an installation, use the command: "module spider opencv/4.5.4". That command also emits information on usage and installation details.