Owens

LAMMPS 5Jun19 is available

Date: 
Monday, August 5, 2019 - 3:00pm
Supercomputer: 

LAMMPS stable version 5Jun19 has been installed with MVAPICH2, OpenMPI, and IntelMPI on Owens and Pitzer.  These are GPU enabled installations.  Usage is via the module lammps/5Jun19.  For installation details, such as, available packages and example batch scripts, use command:  "module help lammps/5Jun19".  For help loading an installation, use command:  "module spider lammps/5Jun19".

Bismark

Bismark is a program to map bisulfite treated sequencing reads to a genome of interest and perform methylation calls in a single step.

Availability and Restrictions

Versions

The following versions of bedtools are available on OSC clusters:

Gurobi

Gurobi is a mathematical optimization solver that supports a variety of programming and modeling languages.

Availability and Restrictions

Versions

The following versions of bedtools are available on OSC clusters:

LS-OPT

LS-OPT is a package for design optimization, system identification, and probabilistic analysis with an interface to LS-DYNA.

Availability and Restrictions

Versions

The following versions of bedtools are available on OSC clusters:

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