Git is a version control system used for tracking file changes and facilitating collaborative work.
Git is available on all OSC clusters. Only one version is available at any given time. To find out the current version:
git version
Git is available to all OSC users. If you have any questions, please contact OSC Help.
Blender is the free and open source 3D creation suite. It supports the entirety of the 3D pipeline—modeling, rigging, animation, simulation, rendering, compositing and motion tracking, even video editing and game creation.
CMake is a family of compilation tools that can be used to build, test and package software.
The current versions of CMake available at OSC are:
This page provides a list of the scientific database available at OSC.
Linaro DDT is a graphical debugger for HPC applications. It supports pthreads, OpenMP, or MPI code on CPU, GPU, and MIC based architectures.
The Linaro DDT versions currently available at OSC are:
FastQC provides quality control checks of high throughput sequence data that identify areas of the data that may cause problems during further analysis.
Perl is a family of programming languages.
Cufflinks is a program that analyzes RNA -Seq samples. It assembles aligned RNA-Seq reads into a set of transcripts, then inspects the transcripts to estimate abundances and test for differential expression and regulation in the RNA-Seq reads.
HISAT2 is a graph-based alignment program that maps DNA and RNA sequencing reads to a population of human genomes.
Apptainer (formerly Singularity) is a container system designed for use on High Performance Computing (HPC) systems. It allows users to run both Docker and Singularity containers.
