Java is a concurrent, class-based, object-oriented programming language.
Java is available on all OSC clusters. Only one version is available at any given time. To find out the current version, run:
java --version
Feel free to contact OSC Help if you need other versions for your work.
Git is a version control system used for tracking file changes and facilitating collaborative work.
Git is available on all OSC clusters. Only one version is available at any given time. To find out the current version:
git version
Git is available to all OSC users. If you have any questions, please contact OSC Help.
Blender is the free and open source 3D creation suite. It supports the entirety of the 3D pipeline—modeling, rigging, animation, simulation, rendering, compositing and motion tracking, even video editing and game creation.
OSC periodically updates The NCBI BLAST database.
BLAST database is available on the Pitzer and Cardinal clusters. The versions currently available at OSC are:
CMake is a family of compilation tools that can be used to build, test and package software.
The current versions of CMake available at OSC are:
This page provides a list of the scientific database available at OSC.
VMD is a visulaization program for the display and analysis of molecular systems.
The following versions of VMD are available on OSC clusters:
ABAQUS is a finite element analysis program owned and supported by SIMULIA, the Dassault Systèmes brand for Realistic Simulation.
The available programs are ABAQUS/CAE, ABAQUS/Standard and ABAQUS/Explicit. The versions currently available at OSC are:
FastQC provides quality control checks of high throughput sequence data that identify areas of the data that may cause problems during further analysis.
Perl is a family of programming languages.
