Cardinal Lightweight Desktop Not Fully Working
There is an issue with sharing GPUs with multiple users on the Cardinal Lightweight Desktop. We are currently working on resolving this issue.
Cardinal
Rosetta
Rosetta
Rosetta is a software suite that includes algorithms for computational modeling and analysis of protein structures. It has enabled notable scientific advances in computational biology, including de novo protein design, enzyme design, ligand docking, and structure prediction of biological macromolecules and macromolecular complexes.
Globus downtime at 10:00 AM EDT on 11/02/2024
Globus services (including Auth, Transfer, Flows, Search, Timer, Compute, GlobusID, and Action Providers) will be unavailable for up to 1.5 hours beginning at 10:00 AM EDT on Saturday, November 2, 2024, due to planned maintenance. Transfers in progress at the start of the downtime will resume from the last checkpoint when services are restored. For more details, please visit: https://www.globus.org/blog/maintenance-downtime-for-database-upgrades-saturday-november-2-2024.
Migrating jobs from other clusters
We have prepared "Getting Started with Cardinal" course on the ScarletCanvas platform. This course offers essential guidance for migrating jobs from other clusters to the Cardinal cluster at the Ohio Supercomputer Center (OSC).
DSI Studio 2024.June
Date:
Friday, October 4, 2024 - 10:15pm
System(s):
DSI Studio 2024.June is now available on and Cardial via module load dsi-studio/2024.June.
Cardinal Software Environment
The Cardinal cluster is now running on Red Hat Enterprise Linux (RHEL) 9, introducing several software-related changes compared to the RHEL 7 environment used on the Pitzer cluster. These updates provide access to modern tools and libraries but may also require adjustments to your workflows. Key software changes and available software are outlined in the following sections.
High Bandwidth Memory
Overview of the High Bandwidth Memory on Cardinal's Dense compute nodes
Cardinal Programming Environment
Compilers
The Cardinal cluster supports C, C++, and Fortran programming languages. The available compiler suites include Intel, oneAPI, and GCC. By default, the Intel development toolchain is loaded. The table below lists the compiler commands and recommended options for compiling serial programs. For more details and best practices, please refer to our compilation guide.
PyTorch 2.4.0 available
A PyTorch 2.4.0 conda environment is now available. Usage via: module load pytorch/2.4.0 See OSC PyTorch software page for more details.
