Negative Balance Policy Effective Oct. 1
Updated negative balance policy to be implemented on October 1. See https://www.osc.edu/resources/technical_support/supercomputing-policies for more details. Contact oschelp@osc.edu with questions.
Pitzer
VMD 1.9.4 available on Pitzer
Date:
Monday, August 12, 2019 - 2:00pm
System(s):
VMD 1.9.4 (a35) has been installed on Pitzer cluster; usage is via the module vmd/1.9.4. For information on available executables and installation details see the software page for VMD.
LAMMPS 5Jun19 is available
LAMMPS stable version 5Jun19 has been installed with MVAPICH2, OpenMPI, and IntelMPI on Owens and Pitzer. These are GPU enabled installations. Usage is via the module lammps/5Jun19. For installation details, such as, available packages and example batch scripts, use command: "module help lammps/5Jun19". For help loading an installation, use command: "module spider lammps/5Jun19".
Negative Balance Policy Updates
Updated negative balance policy to be implemented on October 1. Public comment period through August 31. Please see https://www.osc.edu/resources/technical_support/supercomputing-policies/proposed_osc_policies_for_public_comments.
Gurobi
Gurobi is a mathematical optimization solver that supports a variety of programming and modeling languages.
Availability and Restrictions
Versions
The following versions of bedtools are available on OSC clusters:
BWA Software Vulnerability
Due to a recent software vulnerability discovered in bwa versions 0.7.17 and 0.7.13, it is highly recommended that you immediately stop using these versions and instead use bwa/0.7.17-r1198 which contains a patch to mitigate this vulnerability.
Details on the vulnerability can be found in the following webpages:
https://nvd.nist.gov/vuln/detail/CVE-2019-10269#vulnCurrentDescriptionTitle
https://coreymhudson.github.io/bwa_vulnerabilties/
Please contact OSC Help if you have any questions or concerns.
Toll Free: (800) 686-6472
Local: (614) 292-1800
Email: oschelp@osc.ed
