Cardinal

TurboVNC

TurboVNC is an implementation of VNC optimized for 3D graphics rendering.  Like other VNC software, TurboVNC can be used to create a virtual desktop on a remote machine, which can be useful for visualizing CPU-intensive graphics produced remotely.

Availability and Restrictions

Versions

The versions currently available at OSC are:

Python

Python is a high-level, multi-paradigm programming language that is both easy to learn and useful in a wide variety of applications.  Python has a large standard library as well as a large number of third-party extensions, most of which are completely free and open source. 

Stata

Stata is a complete, integrated statistical package that provides everything needed for data analysis, data management, and graphics. 32-processor MP version is currently available at OSC.

OpenFOAM

OpenFOAM is a suite of computational fluid dynamics applications. It contains myriad solvers, both compressible and incompressible, as well as many utilities and libraries.

Availability and Restrictions

Versions

The following versions of OpenFOAM are available on OSC clusters:

MATLAB

MATLAB is a technical computing environment for high-performance numeric computation and visualization. MATLAB integrates numerical analysis, matrix computation, signal processing, and graphics in an easy-to-use environment where problems and solutions are expressed just as they are written mathematically--without traditional programming.

NetCDF

NetCDF (Network Common Data Form) is an interface for array-oriented data access and a library that provides an implementation of the interface. The netcdf library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data.

NAMD

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD generally scales well on OSC platforms and offers a variety of modelling techniques. NAMD is file-compatible with AMBER, CHARMM, and X-PLOR.

Storage Documentation

Home directory

Policy

Please revew the OSC Home storage policy in our Policy page.

Usage

Each user ID has a home directory on the NetApp WAFL service. You have the same home directory regardless of what system you’re on, including all login nodes and all compute nodes, so your files are accessible everywhere. Most of your work in the login environment will be done in your home directory.

LS-DYNA

LS-DYNA is fully migrated from the Owens cluster to the Cardinal cluster on December 17, 2024. 

LS-DYNA is a general purpose finite element code for simulating complex structural problems, specializing in nonlinear, transient dynamic problems using explicit integration. LS-DYNA is one of the codes developed at Livermore Software Technology Corporation (LSTC).

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