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SUG Conference - October 27, 2022
Agenda
Owens, Pitzer
This page documents the known issues for migrating jobs from Torque to Slurm.
$PBS_NODEFILE and $SLURM_JOB_NODELIST
Please be aware that $PBS_NODEFILE is a file while $SLURM_JOB_NODELIST is a string variable.
The analog on Slurm to cat $PBS_NODEFILE is srun hostname | sort -n
Ascend, Cardinal, Pitzer
Using
How to Submit Interactive jobs
There are different ways to submit interactive jobs.
Using sinteractive
You can use the custom tool sinteractive as:
Using ngbrader in Jupyter
Install nbgrader
You can install nbgrader in a notebook:
OSC provide an isolated and custom Jupyter environment for each classroom project that requires Jupyter Notebook or JupyterLab.
Ascend, Cardinal, Pitzer
Submit Jobs
| Use | Torque/Moab Command | Slurm Equivalent |
|---|---|---|
| Submit batch job | qsub <jobscript> |
sbatch <jobscript> |
| Submit interactive job | qsub -I [options] |
|
Owens, Pitzer
Overview
Slurm, which stands for Simple Linux Utility for Resource Management, is a widely used open-source HPC resource management and scheduling system that originated at Lawrence Livermore National Laboratory.
Ohio academics should visit the fee structure page for pricing information.
All others should contact OSC Sales for pricing information.
All others should contact OSC Sales for pricing information.
If there are questions/concerns on charging at OSC, please contact OSC Help.
Job charging based on usage
OSC offers the use of budgets to limit the amount of charges incurred on projects.
Active budget
Once a budget has been approved, it (and the project it was requested from) becomes active. Having an active project allows users on that project to submit batch jobs to use OSC resources.
