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Condo model refers to that the participants (condo owners) lease one or more compute nodes for the shared cluster while OSC provides all infrastructure, as well as maintenance and services. CCAPP Condo on Pitzer cluster is owned by the Center for Cosmology and AstroParticle Physics, at OSU. Prof. Annika Peter has been heavily involved in specifying requirements.
Hardware
Detailed system specifications:
For more information about citations of OSC, visit https://www.osc.edu/citation.
To cite Pitzer, please use the following information:
Ohio Supercomputer Center. (2018). Pitzer Cluster. Ohio Supercomputer Center. https://doi.org/10.82404/GYT1-JH87
BibTeX:
These are the public key fingerprints for Pitzer:
pitzer: ssh_host_rsa_key.pub = 8c:8a:1f:67:a0:e8:77:d5:4e:3b:79:5e:e8:43:49:0e
pitzer: ssh_host_ed25519_key.pub = 6d:19:73:8e:b4:61:09:a9:e6:0f:e5:0d:e5:cb:59:0b
pitzer: ssh_host_ecdsa_key.pub = 6f:c7:d0:f9:08:78:97:b8:23:2e:0d:e2:63:e7:ac:93
Desmond is a software package that perform high-speed molecular dynamics simulations of biological systems on conventional commodity clusters, general-purpose supercomputers, and GPUs. The code uses novel parallel algorithms and numerical techniques to achieve high performance and accuracy on platforms containing a large number of processors, but may also be executed on a single computer. Desmond includes code optimized for machines with an NVIDIA GPU.
Self-Signup for Accounts
1. Navigate to MyOSC, our client portal.
2. Click the "Sign Up" button and submit the form.
Client portal password and username options
Please visit MyOSC, our client portal website.
Change password while already logged in
Click "Change Password" from the dropdown menu in the upper-right corner where the full name of the user is shown.
A successful password change redirects back to the dashboard page. There is also a message displayed confirming the change and providing other information.
Replace MV2_ENABLE_AFFINITY=0 with MV2_CPU_BINDING_POLICY=hybrid.
In the client portal, interactive reporting is provided using Oracle Application Express (APEX) which allows end users to query data and customize reports. This interactive reporting allows users to:
Interactive reporting of HPC job activity
The HPC Job Activity menu item opens a powerful reporting tool. By default, the report shows all activity over the last 30 days for projects you are authorized to view usage of. There are simple filters available at the top to put in a specific job ID, narrow the report to a specific project, or select a specific date range.