Clustal W

Clustal W is a multiple sequence alignment program written in C++.

Availability and Restrictions

Versions

The following versions of bedtools are available on OSC clusters:

Version Owens Pitzer
2.1 X* X*
* Current default version

You can use module spider clustalw to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.

Access

Clustal W is available to all OSC users without restriction.

Publisher/Vendor/Repository and License Type

GNU Lesser GPL.

Usage

Usage on Owens

Set-up

To configure your environment for use of metilene, run the following command: module load clustalw. The default version will be loaded. To select a particular MUSCLE version, use module load clustalw/version. For example, use module load clustalw/2.1 to load Clustal W 2.1.

Usage on Pitzer

Set-up

To configure your environment for use of metilene, run the following command: module load clustalw. The default version will be loaded. To select a particular MUSCLE version, use module load clustalw/version. For example, use module load clustalw/2.1 to load Clustal W 2.1.

Further Reading

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