The FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing.
Availability and Restrictions
The following versions of FASTX-Toolkit are available on OSC clusters:
You can use
module spider fastx to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.
FASTX-Toolkit is available to all OSC users. If you have any questions, please contact OSC Help.
Publisher/Vendor/Repository and License Type
Assaf Gordon, Open source
Usage on Owens
module load fastx. The default version will be loaded. To select a particular FASTX-Toolkit version, use
module load fastx/version. For example, use
module load fastx/0.0.14 to load FASTX-Toolkit 0.0.14.