GMAP is a genomic mapping and alignment program for mRNA and EST sequences.
Availability and Restrictions
The following versions of GMAP are available on OSC clusters:
You can use
module spider gmap to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.
GMAP is available to all OSC users without restriction.
Publisher/Vendor/Repository and License Type
Genentech, Inc., Open source
Usage on Owens
module load gmap. The default version will be loaded. To select a particular GMAP version, use
module load gmap/version. For example, use
module load gmap/2016-06-09to load GMAP 2016-06-09.