GMAP is a genomic mapping and alignment program for mRNA and EST sequences.
Availability and Restrictions
The following versions of GMAP are available on OSC clusters:
* Current default version
You can use
module spider gmap to view available modules for a given machine. Feel free to contact OSC Help if you need other versions for your work.
GMAP is available to all OSC users. If you have any questions, please contact OSC Help.
Publisher/Vendor/Repository and License Type
Genentech, Inc., Open source
Usage on Owens
To configure your environment for use of GMAP, run the following command:
module load gmap. The default version will be loaded. To select a particular GMAP version, use
module load gmap/version. For example, use
module load gmap/2016-06-09to load GMAP 2016-06-09.
Fields of Science: