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The Ohio Supercomputer Center (OSC) is experiencing an email delivery problem with several types of messages from MyOSC.
The Ohio Supercomputer Center (OSC) is experiencing an email delivery problem with several types of messages from MyOSC.
OSC is preparing to update Slurm on its production systems to version 23.11.4 on March, 27.
Search our client documentation below, optionally filtered by one or more systems.
Connectome Workbench is an open source, freely available visualization and analysis tool for neuroimaging data, especially data generated by the Human Connectome Project.
Connectome Workbench is available on Owens and Pitzer clusters. These are the versions currently available:
Statewide Users Group Conference Agenda - April 9, 2020
In March 2020, OSC expanded the existing project and scratch storage filesystems by 8.6 petabytes. Adding the existing storage capacity at OSC, this brings the total storage capacity of OSC to ~14 petabytes.
LS-PrePost is an advanced pre and post-processor that is delivered free with LS-DYNA.
The following versions of ls-prepost
are available on OSC clusters:
Globus is a cloud-based service designed to let users move, share, and discover research data via a single interface, regardless of its location or number of files or size.
QGIS is a user friendly Open Source Geographic Information System (GIS) licensed under the GNU General Public License. QGIS is an official project of the Open Source Geospatial Foundation (OSGeo). It runs on Linux, Unix, Mac OSX, Windows and Android and supports numerous vector, raster, and database formats and functionalities.
The following versions of QGIS are available on OSC clusters:
Gaussian is a very popular general purpose electronic structure program. Recent versions can perform density functional theory, Hartree-Fock, Möller-Plesset, coupled-cluster, and configuration interaction calculations among others. Geometry optimizations, vibrational frequencies, magnetic properties, and solution modeling are available. It performs well as black-box software on closed-shell ground state systems.
The XDMoD tool at xdmod.osc.edu can be used to get an overview of how accurate the requested time of jobs are with the elapsed time of jobs.
One way of specifying a time request is:
#SBATCH --time=xx:xx:xx
The elapsed time is how long the job ran for before completing. This can be obtained using the sacct
command.
Bismark is a program to map bisulfite treated sequencing reads to a genome of interest and perform methylation calls in a single step.
The following versions of bedtools are available on OSC clusters: